Alphavirus Leptospira biflexa temperate bacteriophage LE1 Globuloviridae Inovirus Comoviridae Luteoviridae unclassified Fusellovirus Tombusviridae Bromoviridae Caulimoviridae Metapneumovirus Pneumovirinae Heliothis zea virus 1 Lipothrixviridae Hantavirus Bunyaviridae Parvovirinae Parvoviridae Lyssavirus Rhabdoviridae Porcine respiratory and reproductive syndrome virus Torque teno virus Anellovirus Cotesia congregata bracovirus Bracovirus Polydnaviridae Closterovirus Closteroviridae Begomovirus Geminiviridae Alphapapillomavirus Papillomaviridae Norwalk virus Norovirus Caliciviridae Carlavirus Potexvirus Flexiviridae Group 3 species Group 1 species Group 2 species Coronaviridae Potyvirus Potyviridae Hepadnaviridae Morbillivirus Avulavirus Rubulavirus Paramyxovirinae A Rotavirus Orbivirus Reoviridae Human enterovirus B Poliovirus Enterovirus Picornaviridae Orthomyxoviridae Atadenovirus Aviadenovirus Mastadenovirus Adenoviridae unclassified Ranavirus Ranavirus Lymphocystivirus Iridoviridae Flavivirus Bovine viral diarrhea virus 1 Pestivirus Flaviviridae Feldmannia irregularis virus a Ectocarpus siliculosus virus 1 Phaeovirus Coccolithovirus Chlorovirus Phycodnaviridae Parapoxvirus Fowlpox virus Canarypox virus Avipoxvirus Vaccinia virus Variola virus Orthopoxvirus Chordopoxvirinae Betaentomopoxvirus unclassified Entomopoxvirinae Entomopoxvirinae Poxviridae Spodoptera litura NPV Lymantria dispar MNPV Culex nigripalpus NPV unclassified Nucleopolyhedrovirus Nucleopolyhedrovirus Xestia c-nigrum granulovirus unclassified Granulovirus Granulovirus Baculoviridae unclassified Herpesviridae Ictalurivirus Ostreid herpesvirus 1 Ranid herpesvirus 1 Ranid herpesvirus 2 Unassigned Herpesviridae Human herpesvirus 4 Lymphocryptovirus Cercopithecine herpesvirus 17 Human herpesvirus 8 Rhadinovirus Gammaherpesvirinae Simplexvirus Gallid herpesvirus 2 Mardivirus Suid herpesvirus 1 Varicellovirus Alphaherpesvirinae Tupaiid herpesvirus 1 Human herpesvirus 6 Roseolovirus Murid herpesvirus 2 Murid herpesvirus 1 Muromegalovirus Cercopithecine herpesvirus 8 Human herpesvirus 5 Cytomegalovirus Betaherpesvirinae Herpesviridae UNDEFINED Alpharetrovirus Replication competent viruses Mammalian virus group Gammaretrovirus Primate T-lymphotropic virus 1 Deltaretrovirus Simian immunodeficiency virus Human immunodeficiency virus 1 Retroviridae Clostridium botulinum phage C-St Bacteriophage Felix 01 unclassified Caudovirales phi-29-like viruses unclassified P22-like viruses P22-like viruses unclassified T7-like viruses T7-like viruses Cyanophage P60 group unclassified Podoviridae Podoviridae Enterobacteria phage P1 P1-like viruses unclassified P2-like viruses P2-like viruses Staphylococcus phage G1 Staphylococcus phage Twort Natrialba phage PhiCh1 Listeria phage P100 Cyanophage phage S-PM2 Pseudomonas phage EL Pseudomonas phage phiKZ unclassified Myoviridae Enterobacteria phage T4 sensu lato Aeromonas phage Aeh1 Vibrio phage nt-1 sensu lato Enterobacteria phage RB69 Cyanophage P-SSM4 Rhodothermus phage RM378 Enterobacteria phage RB49 Enterobacteria phage RB43 Cyanophage P-SSM2 unclassified T4-like viruses T4-like viruses Myoviridae PhiC31-like viruses T1-like viruses Enterobacteria phage T5 T5-like viruses Bacillus phage SPP1 unclassified Lambda-like viruses Lambda-like viruses Bacteriophage phi JL001 Bacteriophage 53 sensu lato Mycobacterium phage Corndog Mycobacterium phage Barnyard Mycobacteriophage Catera Bacillus phage SPBc2 Mycobacteriophage Wildcat Mycobacterium phage Omega unclassified Siphoviridae Siphoviridae Caudovirales uncultured archaeon environmental samples islandicus uncultured crenarchaeote environmental samples acidocaldarius tokodaii solfataricus Crenarchaeota acidophilum volcanium maripaludis Methanococcaceae Thermococcus Methanothermobacter abyssi furiosus horikoshii Pyrococcus Haloarcula Halobacteria mazei barkeri acetivorans Methanosarcina Methanosarcinaceae Methanosarcinales Methanomicrobia Euryarchaeota Archaea maritima Thermotogae geothermalis radiodurans felis pneumoniae Chlamydophila trachomatis muridarum Chlamydia Chlamydiaceae uncultured bacterium uncultured sulfate-reducing bacterium environmental samples sp. CBDB1 ethenogenes sp. BAV1 Roseiflexus Chloroflexi denticola pallidum Treponema Borrelia burgdorferi Borrelia garinii burgdorferi group Borrelia Spirochaetaceae Spirochaetes Planctomycetaceae phaeoclathratiforme luteolum Pelodictyon phaeovibrioides chlorochromatii limicola phaeobacteroides Chlorobium Chlorobium/Pelodictyon group Chlorobi Crenotrichaceae thetaiotaomicron fragilis Flavobacterium Flavobacteriales unclassified Flavobacteria Flavobacteria Bacteroidetes Bacteroidetes/Chlorobi group Oscillatoriales punctiforme sp. PCC 7120 Nostoc Anabaena Nostocales sp. CC9902 sp. JA-3-3Ab sp. JA-2-3B'a(2-13) sp. WH 8102 sp. RS9917 sp. CC9605 sp. WH 7805 sp. WH 5701 elongatus Synechococcus Synechocystis Chroococcales Cyanobacteria Saccharopolyspora fradiae violaceoruber kanamyceticus clavuligerus Micromonospora griseus hygroscopicus ambofaciens adolescentis Streptosporangineae longum coelicolor avermitilis Propionibacterineae Microbacteriaceae Intrasporangiaceae nicotinovorans aurescens sp. FB24 Micrococcaceae Micrococcineae sp. CcI3 sp. EAN1pec Frankineae ulcerans smegmatis sp. MCS jeikeium diphtheriae sp. JLS sp. KMS leprae avium complex (MAC) efficiens flavescens vanbaalenii glutamicum erythropolis Rhodococcus Nocardiaceae Mycobacterium bovis Mycobacterium tuberculosis tuberculosis complex Corynebacterineae Actinobacteria mobile pneumoniae synoviae capricolum mycoides Ureaplasma pulmonis gallisepticum penetrans hyopneumoniae genitalium Onion yellows phytoplasma Aster yellows witches'-broom phytoplasma asteris Entomoplasmatales Mollicutes Lachnospiraceae Caldicellulosiruptor Syntrophomonadaceae Desulfitobacterium Peptococcaceae sp. OhILAs tetani perfringens acetobutylicum thermocellum beijerinckii phytofermentans difficile Clostridium Clostridiaceae Clostridiales tengcongensis ethanolicus Thermoanaerobacter Clostridia Paenibacillus Paenibacillaceae innocua monocytogenes haemolyticus saprophyticus epidermidis aureus Staphylococcaceae Exiguobacterium stearothermophilus kaustophilus Geobacillus megaterium clausii halodurans licheniformis subtilis sp. NRRL B-14911 Bacillus weihenstephanensis Bacillus anthracis Bacillus thuringiensis Bacillus cereus cereus group Bacillus Bacillaceae Bacillales Leuconostoc Leuconostocaceae faecium faecalis Enterococcaceae johnsonii gasseri salivarius acidophilus sakei plantarum casei reuteri delbrueckii Lactobacillaceae mutans suis thermophilus pneumoniae pyogenes agalactiae Streptococcus Streptococcaceae Lactobacillales Bacilli Firmicutes environmental samples Bdellovibrionales desulfuricans vulgaris Desulfovibrio Desulfovibrionales Syntrophobacterales Myxococcus Myxococcales metallireducens sulfurreducens carbinolicus propionicus uraniumreducens Desulfuromonadales Deltaproteobacteria lari fetus coli upsaliensis jejuni Campylobacteraceae Thiomicrospira denitrificans acinonychis hepaticus pylori Helicobacter Helicobacteraceae Epsilonproteobacteria delta/epsilon subdivisions europaea eutropha Nitrosomonas Azoarcus meningitidis gonorrhoeae Neisseria parapertussis pertussis bronchiseptica avium Alcaligenaceae naphthalenivorans sp. JS666 Polaromonas Comamonadaceae Ralstonia metallidurans necator Cupriavidus mallei xenovorans Burkholderia thailandensis Burkholderia pseudomallei pseudomallei group Burkholderia dolosa Burkholderia sp. 383 Burkholderia cepacia Burkholderia vietnamiensis Burkholderia cenocepacia cepacia complex Burkholderia Burkholderiaceae Burkholderiales Betaproteobacteria litoralis sp. NAP1 Sphingomonas Sphingopyxis Sphingomonadaceae Sphingomonadales Neorickettsia phagocytophilum group marginale Anaplasma Ehrlichia canis Ehrlichia ruminantium Ehrlichia chaffeensis Ehrlichia Anaplasmataceae typhus group endosymbiont of Brugia malayi sp. wMel endosymbiont of Drosophila simulans unclassified Rickettsia endosymbiont of Drosophila ananassae Rickettsia sibirica subgroup Rickettsia rickettsii Rickettsia conorii Rickettsia akari Rickettsia felis spotted fever group Rickettsiaceae Rickettsiales gryphiswaldense magneticum magnetotacticum Magnetospirillum Rhodospirillaceae Gluconobacter Acetobacteraceae Rhodospirillales sp. EE-36 sp. NAS-14.1 Sulfitobacter batsensis granulosus Oceanicola Paracoccus sp. MED193 denitrificans Roseobacter pomeroyi sp. TM1040 Silicibacter sp. 217 nubinhibens Roseovarius capsulatus Rhodobacter Rhodobacteraceae Rhodobacterales quintana henselae bacilliformis abortus suis melitensis sp. BNC1 loti rhizogenes Agrobacterium sp. NGR234 etli leguminosarum Rhizobium Rhizobium/Agrobacterium group Rhizobiaceae sp. BTAi1 japonicum Bradyrhizobium winogradskyi hamburgensis sp. Nb-311A Nitrobacter Bradyrhizobiaceae Rhizobiales Alphaproteobacteria Erwinia tarda Edwardsiella marcescens Serratia vulgaris hydrophila Mannheimia pneumoniae Klebsiella Piscirickettsiaceae Pectobacterium succinogenes pleuropneumoniae Actinobacillus Francisellaceae Photorhabdus ducreyi influenzae Haemophilus paratyphi enterica typhimurium typhi choleraesuis Salmonella Legionellaceae Legionellales sonnei flexneri dysenteriae boydii Shigella profundum sp. SKA34 Photobacterium unclassified Gammaproteobacteria Chromatiaceae Ectothiorhodospiraceae Chromatiales enterocolitica mollaretii bercovieri intermedia pseudotuberculosis frederiksenii pestis Yersinia Oceanospirillaceae Oceanospirillales axonopodis campestris oryzae Xanthomonas Escherichia angustum sp. MED222 sp. Ex25 alginolyticus parahaemolyticus fischeri splendidus vulnificus cholerae Vibrio sp. ADP1 Acinetobacter arcticus cryohalolentis sp. PRwf-1 Psychrobacter Moraxellaceae stutzeri group entomophila fluorescens group genomosp. 2 genomosp. 3 syringae group Pseudomonas resinovorans aeruginosa group Pseudomonas Pseudomonadaceae Pseudomonadales sp. MR-4 sp. MR-7 loihiensis sp. W3-18-1 putrefaciens sp. ANA-3 amazonensis sp. CNPT3 sp. PV-4 frigidimarina haloplanktis baltica oneidensis denitrificans ingrahamii atlantica tunicata Marinobacter Alteromonadaceae Alteromonadales Gammaproteobacteria Proteobacteria Bacteria Parabasalidea Myxogastria Phaeophyceae Bacillariophyta infestans Phytophthora Oomycetes stramenopiles Bangiophyceae Ceramiaceae Ceramiales Gracilaria Florideophyceae Rhodophyta Euglenida Leishmania Trypanozoon Trypanosoma Euglenozoa Peridiniales Dinophyceae Spirotrichea Ciliophora Sarcocystidae parvum hominis bovis annulata parva Piroplasmida Plasmodium vivax (Plasmodium) (Laverania) Plasmodium yoelii Plasmodium berghei Plasmodium chabaudi (Vinckeia) Haemosporida Apicomplexa Alveolata Marchantiophyta Filicales Filicophyta Moniliformopses Bryopsida Bryophyta Picea Pinus Pinaceae reinhardtii Chlamydomonadaceae Chlorophyceae Chlorophyta vinifera stem eudicotyledons Caryophyllaceae Amaranthaceae Caryophyllales Ericales Apiales annuus Asteroideae Cichorioideae Asterales campanulids Gentianales Lamiales annuum Capsicum Ipomoeeae Convolvulaceae tabacum Nicotiana demissum tuberosum Solanum lycopersicum Lycopersicon Solanum Solanales lamiids asterids Myrtales Cucumis Cucurbitales Vicieae trichocarpa Salicaceae Malpighiales Malus Maloideae Fragaria Rosoideae Rosales Glycine Phaseolus Phaseoleae sativa Trifolieae eurosids I Rutaceae Sapindales hirsutum Gossypium Malvoideae rapa napus oleracea Brassica eurosids II rosids eudicotyledons acuminata Zingiberales Hyacinthaceae Orchidaceae Asparagales Zea Sorghum PACCAD clade Hordeum aestivum Triticum Triticeae Pooideae Liliopsida Viridiplantae Mucoraceae Mucorales Neocallimastigales Chytridiomycota Microsporidia Tricholomataceae Psathyrellaceae Agaricales Aphyllophorales Homobasidiomycetes Hymenomycetes Ustilaginomycetes Basidiomycota glabrata albicans Pichia Kluyveromyces bayanus Saccharomyces Saccharomycetaceae Botryotinia Pleosporaceae Pleosporales Dothideomycetes Onygenales Penicillium fumigatus oryzae mitosporic Trichocomaceae Eurotiales Eurotiomycetes Clavicipitaceae Sordariomycetes incertae sedis Sordariaceae Sordariomycetidae Sordariomycetes Pezizomycotina Ascomycota Fungi Brugia Paludicola Cyclophyllidea Heterodera Heteroderidae Tetractinomorpha Demospongiae Porifera Haemonchidae Trichostrongyloidea Strongylida mansoni Actiniaria Hexacorallia Cnidaria briggsae elegans Sternorrhyncha Euhemiptera Hemiptera Paraneoptera Clitellata Annelida/Echiura/Pogonophora group Blattaria Dictyoptera Orthopteroidea Pleocyemata Malacostraca Crustacea Scorpiones Araneoidea Orbicularia Entelegynae Araneomorphae Araneae scapularis Ixodes Acari Chelicerata Noctuidae Noctuoidea Nymphalidae Papilionoidea Bombycoidea Amphiesmenoptera Decapodiformes gigas Pteriomorphia Bivalvia californica Heterobranchia Orthogastropoda Pulmonata Gastropoda Mollusca Hymenoptera Coleoptera mulleri subgroup repleta group Drosophila virilis virilis group Oestroidea Calyptratae Drosophila miranda obscura group Drosophila simulans Drosophila yakuba melanogaster group Brachycera Chironomidae Chironomoidea Anophelinae Nematocera Diptera Protostomia belcheri floridae Galeomorphii Chondrichthyes Stolidobranchia Ascidiacea Urochordata Echinodermata Scorpaeniformes Salmo Pleuronectidae Pleuronectiformes mykiss Oncorhynchus Cyprinodontoidei Cyprinodontiformes Smegmamorpha Gobioidei Sparidae Percoidei Oreochromis Haplochromini Cichlidae Labroidei Perciformes Takifugu Tetraodon Euteleostei Cobitoidea Cyprininae Ictaluridae Siluriphysi Otocephala Actinopterygii Salamandroidea Caudata Hyloidea Ranoidea Neobatrachia laevis Amphibia Iguania japonicus Crotalinae Viperidae Colubroidea Serpentes Scleroglossa Fringillidae Passeroidea Passeriformes Sauropsida Metatheria Caprinae Suina Bovinae Cetartiodactyla Felinae Feliformia Carnivora Laurasiatheria Sciuridae Hystricognathi Cricetinae Cricetidae sp. Rattus Mus Glires Cebidae Platyrrhini fascicularis mulatta Pan Hominoidea Primates Euarchontoglires Mammalia Sarcopterygii Deuterostomia Metazoa Fungi/Metazoa group Eukaryota